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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs7276032 chr21:15480829 A/G 0.000207 407 15.53 15.57 8.12 KM Plot
LGG rs72760941 chr10:1141244 A/G 1.15E-5 399 16.33 14.77 5.93 KM Plot
LGG rs72760943 chr10:1143104 G/A 1.15E-5 399 16.33 14.77 5.93 KM Plot
LGG rs7276787 chr21:45578339 C/T 0.000105 394 4.98 16.6 15.2 KM Plot
LGG rs72773504 chr5:93932629 T/A 4.45E-5 404 14.78 17.73 9.8 KM Plot
LGG rs72773507 chr5:93936862 G/A 4.65E-5 403 14.77 17.73 9.8 KM Plot
LGG rs72773513 chr5:93954054 T/G 4.42E-5 404 14.85 17.73 9.8 KM Plot
LGG rs72773522 chr5:93974276 A/G 4.87E-5 404 14.75 17.73 9.8 KM Plot
LGG rs72773523 chr5:93975342 A/G 4.32E-5 407 14.78 17.63 9.8 KM Plot
LGG rs72773524 chr5:93975602 T/C 4.32E-5 407 14.78 17.63 9.8 KM Plot
LGG rs72775304 chr5:94081002 G/A 6.57E-5 393 14.78 17.63 7.13 KM Plot
LGG rs72778215 chr10:910779 G/T 5.06E-6 406 15.02 17.38 10.57 KM Plot
LGG rs72778228 chr10:938435 A/G 0.000154 402 15.18 16.38 13.3 KM Plot
LGG rs72822626 chr5:167758037 G/T 8.41E-7 401 15.93 14.53 16.82 KM Plot
LGG rs72822628 chr5:167758129 G/T 8.41E-7 401 15.93 14.53 16.82 KM Plot